Preheat the oven to 375°F (190°C). Prepare a jumbo silicone muffin tray or a muffin tin sprayed with non-stick spray.
Place the cottage cheese in a colander with small holes, rinse under cold water, and let drain thoroughly.
In a large bowl, combine the almond flour, flax seed meal, finely grated Parmesan, baking powder, and Spike Seasoning; stir until evenly mixed.
In a separate bowl, beat the eggs until well combined, then mix in the drained cottage cheese and the thinly sliced green onions.
Pour the wet mixture into the dry ingredients and stir with a spatula or spoon until a stiff, even batter forms.
Divide the batter among 12 muffin cups, starting with about 1/3 cup each and adding a little more if any batter remains.
Bake for 25–27 minutes, or until the tops are lightly browned and feel firm to the touch. Remove from oven and let cool slightly before removing from cups.